Hakai Segmentation

Segmentation Tools for Remotely Sensed RPAS Imagery

Test Status Documentation Status License Version

Getting Started

Please see the Beginner Guide if you are new to Anaconda and command line tools.

If you have worked with Anaconda before, start with the more brief installation instructions, followed by the documentation for the CLI and/or python library interfaces.


  • Kelp presence/absence detection in RGB RPAS imagery.

  • Kelp macrocystis/nereocystis detection in RGB RPAS imagery.

  • Mussel presence/absence detection in RGB RPAS imagery.



If you find an issue using the tool, bug report can be files using the following links. Comments or questions are also greatly appreciated!


The project is licensed under the MIT license.


  • Taylor Denouden wrote the code and documentation.

  • Luba Reshitnyk assembled the training data to produce the tool.

  • Sarah Schroeder wrote the Beginner Guide.